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This page lists all class projects.

Please see the Index to Student Projects.

Date

Title & Links

Notes

06/04/2013 BLAST and Homology (PDF)
data file
In this in-class exercise, students learn the basics of BLAST searches.
06/06/2013 Practice Annotation Problem 1 (PDF)
Dana fosmids at GEP
In this in-class exercise, students predict the genes present on a D. ananassae fosmid.
06/11/2013 Claim Research Projects Students claim research projects in D. ananassae (3L control) and D. biarmipes (dot).
06/18/2013 Practice Annotation Problem 2 (PDF)
Dana fosmids at GEP
In this in-class exercise, students build a gene model for the Hem gene of D. ananassae.
06/25/2013 Preparation of the
GEP Annotation Report
This is the template for submitting project results to the GEP.
06/25/2013 Annotation Instruction Sheet at GEP. This has some great tips on annotation.
06/25/2013 Annotation Strategy Guide at GEP. This has some great tips on annotation.
07/16/2013 Human Genome Annotation
(PDF, links)
This is an introduction to annotating human genomes at the PGP.